Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949055.1_cds_XP_016490124.1_80570
CDS Infomation

[gene=LOC107809933] [db_xref=GeneID:107809933] [protein=pheophytinase, chloroplastic-like isoform X5] [protein_id=XP_016490124.1] [location=complement(join(8373..8658,9263..9354,10147..10393,10512..10682,11191..11329,11441..11474))] [gbkey=CDS]
Sequence

ATGCCCCCTTCTGTAGTTGCTGAATCCTCTCAAGGCTTGCAGCAATTACCATTTAAACCA
GAGGGTTACAACTACTGGACATGGCGAGGCCACAAAATTCATTATGTAGAGGAAGGGGAA
GGGTTTCCAGTTGTTCTGATTCACGGATTTGGTACTTCTGCTTTCCATTGGAGGTATAAC
ATACCTGAGCTGGCTAAAAATTACAAGGTGTATGCTCTGGATTTGCTCGGATTTGGCTGG
AGTGAGAAGGCACAAATAGACTATGATGCCTTGATTTGGAGAGACCAGCTTGTCGACTTC
TTAAAGGAGATAGTTAAACAACACACAGTTTTAGTAGGGAACGGTCTTGGAGGATTTACT
ACATTGTTAGCAGCAGCAGAACTGCCAGCTGAGCAAGTCAAGGGGGTTACCTTGTTAAAT
AGTGCAGGACAATTTGGGGATGACATTACTACAACTGACACAAGTGAAGAGACAGCCTTA
AGAAAGTTCATTGTAAGGCCAGTAGAGGAAATCTTTCAACGTGTTGTCGTCGGATTGGCA
TTTTGGCTATCCATGCGACCAGCTCAAATTGAAGCTCAGCTGAAGAGTGGTGTCTATAGA
AACCATTCGAATGTGGATGATTACCTCCTCAATTCAATTGCTATTCCTGCTGCTGATCCA
AATGCAGGGGAAGTTTATTACCGACTATTAAGACAACTTATATCGAACCCGAGAAAGTAT
ACACTTGAGAGTGTGTTGAGCCAACTCTCTTGCCGATTGTTGTTGTTGTGGGGTGACCTA
GACCCTTGGGTTGATCATGCAAAGGCAAATCGAATTAAGGAGTTCTACCCAAACACATCG
CTTGTAAACTTGCAGGCAGGGCATTACCCCCACGACGAAGTTCCACTACTAGTGAATAAA
GCTTTATTAGATTGGTTATCAACCTTGGGGTTGTCAGAACCTTCTCTTCGAACAGTGCCA
GAAATTTAG

Peptide Sequence

PEP ID

XP_016490124.1
PEP Infomation

PREDICTED: pheophytinase, chloroplastic-like isoform X5 [Nicotiana tabacum]
Sequence

MPPSVVAESSQGLQQLPFKPEGYNYWTWRGHKIHYVEEGEGFPVVLIHGFGTSAFHWRYN
IPELAKNYKVYALDLLGFGWSEKAQIDYDALIWRDQLVDFLKEIVKQHTVLVGNGLGGFT
TLLAAAELPAEQVKGVTLLNSAGQFGDDITTTDTSEETALRKFIVRPVEEIFQRVVVGLA
FWLSMRPAQIEAQLKSGVYRNHSNVDDYLLNSIAIPAADPNAGEVYYRLLRQLISNPRKY
TLESVLSQLSCRLLLLWGDLDPWVDHAKANRIKEFYPNTSLVNLQAGHYPHDEVPLLVNK
ALLDWLSTLGLSEPSLRTVPEI

Transcript Sequence

Gene sequence data has not been registered.